hg19_blacklist: BED file for hg19 blacklisted regions
In dozmorovlab/HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
hg19_blacklist R Documentation
BED file for hg19 blacklisted regions
Description
A BED file with regions which may be
excluded from your Hi-C data analysis.
Usage
hg19_blacklist
Format
A data.frame with 3 columns and 1649 rows:
- chr
chromosome for the region
- start
start location of the region
- end
end location of the region
Value
A data.frame
Source
Data from UCSC
http://genome.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeMapability
dozmorovlab/HiCcompare documentation built on June 30, 2023, 3:09 a.m.
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| hg19_blacklist | R Documentation |
BED file for hg19 blacklisted regions
Description
A BED file with regions which may be excluded from your Hi-C data analysis.
Usage
hg19_blacklist
Format
A data.frame with 3 columns and 1649 rows:
- chr
chromosome for the region
- start
start location of the region
- end
end location of the region
Value
A data.frame
Source
Data from UCSC http://genome.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeMapability
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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