Files in drisso/scRNAseq

Collection of Public Single-Cell RNA-Seq Datasets

R/AztekinTailData.R R/BachMammaryData.R R/BacherTCellData.R R/BaronPancreasData.R R/BhaduriOrganoidData.R R/BuettnerESCData.R R/CampbellBrainData.R R/ChenBrainData.R R/DarmanisBrainData.R R/ERCCSpikeInConcentrations.R R/ErnstSpermatogenesisData.R R/FletcherOlfactoryData.R R/GiladiHSCData.R R/GrunHSCData.R R/GrunPancreasData.R R/HeOrganAtlasData.R R/HermannSpermatogenesisData.R R/HuCortexData.R R/JessaBrainData.R R/KolodziejczykESCData.R R/KotliarovPBMCData.R R/LaMannoBrainData.R R/LawlorPancreasData.R R/LengESCData.R R/LunSpikeInData.R R/MacoskoRetinaData.R R/MairPBMCData.R R/MarquesBrainData.R R/MessmerESCData.R R/MuraroPancreasData.R R/NestorowaHSCData.R R/NowakowskiCortexData.R R/PaulHSCData.R R/PollenGliaData.R R/ReprocessedData.R R/RichardTCellData.R R/RomanovBrainData.R R/SegerstolpePancreasData.R R/ShekharRetinaData.R R/StoeckiusHashingData.R R/TasicBrainData.R R/UsoskinBrainData.R R/WuKidneyData.R R/XinPancreasData.R R/ZeiselBrainData.R R/ZeiselNervousData.R R/ZhaoImmuneLiverData.R R/ZhongPrefrontalData.R R/ZilionisLungData.R R/convert_to_ensembl.R R/create_sce.R R/listDatasets.R inst/scripts/2.0.0/make-aztekin-tail-data.Rmd inst/scripts/2.0.0/make-aztekin-tail-metadata.R inst/scripts/2.0.0/make-bach-mammary-data.Rmd inst/scripts/2.0.0/make-bach-mammary-metadata.R inst/scripts/2.0.0/make-baron-pancreas-data.Rmd inst/scripts/2.0.0/make-baron-pancreas-metadata.R inst/scripts/2.0.0/make-buettner-esc-data.Rmd inst/scripts/2.0.0/make-buettner-esc-metadata.R inst/scripts/2.0.0/make-campbell-brain-data.Rmd inst/scripts/2.0.0/make-campbell-brain-metadata.R inst/scripts/2.0.0/make-chen-brain-data.Rmd inst/scripts/2.0.0/make-chen-brain-metadata.R inst/scripts/2.0.0/make-grun-hsc-data.Rmd inst/scripts/2.0.0/make-grun-hsc-metadata.R inst/scripts/2.0.0/make-grun-pancreas-data.Rmd inst/scripts/2.0.0/make-grun-pancreas-metadata.R inst/scripts/2.0.0/make-kolodziejczyk-esc-data.Rmd inst/scripts/2.0.0/make-kolodziejczyk-esc-metadata.R inst/scripts/2.0.0/make-lamanno-brain-data.Rmd inst/scripts/2.0.0/make-lamanno-brain-metadata.R inst/scripts/2.0.0/make-lawlor-pancreas-data.Rmd inst/scripts/2.0.0/make-lawlor-pancreas-metadata.R inst/scripts/2.0.0/make-legacy-data.Rmd inst/scripts/2.0.0/make-legacy-metadata.R inst/scripts/2.0.0/make-leng-esc-data.Rmd inst/scripts/2.0.0/make-leng-esc-metadata.R inst/scripts/2.0.0/make-lun-spikein-data.Rmd inst/scripts/2.0.0/make-lun-spikein-metadata.R inst/scripts/2.0.0/make-macosko-retina-data.Rmd inst/scripts/2.0.0/make-macosko-retina-metadata.R inst/scripts/2.0.0/make-marques-brain-data.Rmd inst/scripts/2.0.0/make-marques-brain-metadata.R inst/scripts/2.0.0/make-messmer-esc-data.Rmd inst/scripts/2.0.0/make-messmer-esc-metadata.R inst/scripts/2.0.0/make-muraro-pancreas-data.Rmd inst/scripts/2.0.0/make-muraro-pancreas-metadata.R inst/scripts/2.0.0/make-nestorowa-hsc-data.Rmd inst/scripts/2.0.0/make-nestorowa-hsc-metadata.R inst/scripts/2.0.0/make-richard-tcell-data.Rmd inst/scripts/2.0.0/make-richard-tcell-metadata.R inst/scripts/2.0.0/make-romanov-brain-data.Rmd inst/scripts/2.0.0/make-romanov-brain-metadata.R inst/scripts/2.0.0/make-segerstolpe-pancreas-data.Rmd inst/scripts/2.0.0/make-segerstolpe-pancreas-metadata.R inst/scripts/2.0.0/make-shekhar-retina-data.Rmd inst/scripts/2.0.0/make-shekhar-retina-metadata.R inst/scripts/2.0.0/make-tasic-brain-data.Rmd inst/scripts/2.0.0/make-tasic-brain-metadata.R inst/scripts/2.0.0/make-usoskin-brain-data.Rmd inst/scripts/2.0.0/make-usoskin-brain-metadata.R inst/scripts/2.0.0/make-xin-pancreas-data.Rmd inst/scripts/2.0.0/make-xin-pancreas-metadata.R inst/scripts/2.0.0/make-zeisel-brain-data.Rmd inst/scripts/2.0.0/make-zeisel-brain-metadata.R inst/scripts/2.2.0/make-ercc-concentrations-metadata.R inst/scripts/2.2.0/make-paul-hsc-data.Rmd inst/scripts/2.2.0/make-paul-hsc-metadata.R inst/scripts/2.4.0/make-hermann-spermatogenesis-data.Rmd inst/scripts/2.4.0/make-hermann-spermatogenesis-metadata.R inst/scripts/2.4.0/make-hu-cortex-data.Rmd inst/scripts/2.4.0/make-hu-cortex-metadata.R inst/scripts/2.4.0/make-kotliarov-pbmc-data.Rmd inst/scripts/2.4.0/make-kotliarov-pbmc-metadata.R inst/scripts/2.4.0/make-mair-pbmc-data.Rmd inst/scripts/2.4.0/make-mair-pbmc-metadata.R inst/scripts/2.4.0/make-stoeckius-hashing-data.Rmd inst/scripts/2.4.0/make-stoeckius-hashing-metadata.R inst/scripts/2.4.0/make-wu-kidney-data.Rmd inst/scripts/2.4.0/make-wu-kidney-metadata.R inst/scripts/2.4.0/make-zilionis-lung-data.Rmd inst/scripts/2.4.0/make-zilionis-lung-metadata.R inst/scripts/2.6.0/make-bacher-tcell-data.Rmd inst/scripts/2.6.0/make-bacher-tcell-metadata.R inst/scripts/2.6.0/make-bhaduri-organoid-data.Rmd inst/scripts/2.6.0/make-bhaduri-organoid-metadata.R inst/scripts/2.6.0/make-bunis-hspc-data.Rmd inst/scripts/2.6.0/make-bunis-hspc-metadata.R inst/scripts/2.6.0/make-darmanis-brain-data.Rmd inst/scripts/2.6.0/make-darmanis-brain-metadata.R inst/scripts/2.6.0/make-ernst-spermatogenesis-data.Rmd inst/scripts/2.6.0/make-ernst-spermatogenesis-metadata.R inst/scripts/2.6.0/make-fletcher-olfactory-data.Rmd inst/scripts/2.6.0/make-fletcher-olfactory-metadata.R inst/scripts/2.6.0/make-giladi-hsc-data.Rmd inst/scripts/2.6.0/make-giladi-hsc-metadata.R inst/scripts/2.6.0/make-he-organ-atlas-data.Rmd inst/scripts/2.6.0/make-he-organ-atlas-metadata.R inst/scripts/2.6.0/make-jessa-brain-data.Rmd inst/scripts/2.6.0/make-jessa-brain-metadata.R inst/scripts/2.6.0/make-nowakowski-cortex-data.Rmd inst/scripts/2.6.0/make-nowakowski-cortex-metadata.R inst/scripts/2.6.0/make-pollen-glia-data.Rmd inst/scripts/2.6.0/make-pollen-glia-metadata.R inst/scripts/2.6.0/make-zeisel-nervous-data.Rmd inst/scripts/2.6.0/make-zeisel-nervous-metadata.R inst/scripts/2.6.0/make-zhao-immune-liver-data.Rmd inst/scripts/2.6.0/make-zhao-immune-liver-metadata.R inst/scripts/2.6.0/make-zhong-prefrontal-data.Rmd inst/scripts/2.6.0/make-zhong-prefrontal-metadata.R longtests/testthat.R longtests/testthat/test-bacher-tcell.R longtests/testthat/test-bhaduri-organoid.R longtests/testthat/test-darmanis-brain.R longtests/testthat/test-ernst-spermatogenesis.R longtests/testthat/test-giladi-hsc.R longtests/testthat/test-he-organ-atlas.R longtests/testthat/test-jessa-brain.R longtests/testthat/test-nowakowski-cortex.R longtests/testthat/test-pollen-glia.R longtests/testthat/test-zeisel-nervous.R longtests/testthat/test-zhao-immune-liver.R longtests/testthat/test-zhong-prefrontal.R man/AztekinTailData.Rd man/BachMammaryData.Rd man/BacherTCellData.Rd man/BaronPancreasData.Rd man/BhaduriOrganoidData.Rd man/BuettnerESCData.Rd man/CampbellBrainData.Rd man/ChenBrainData.Rd man/DarmanisBrainData.Rd man/ERCCSpikeInConcentrations.Rd man/ErnstSpermatogenesisData.Rd man/FletcherOlfactoryData.Rd man/GiladiHSCData.Rd man/GrunHSCData.Rd man/GrunPancreasData.Rd man/HeOrganAtlasData.Rd man/HermannSpermatogenesisData.Rd man/HuCortexData.Rd man/JessaBrainData.Rd man/KolodziejczykESCData.Rd man/KotliarovPBMCData.Rd man/LaMannoBrainData.Rd man/LawlorPancreasData.Rd man/LengESCData.Rd man/LunSpikeInData.Rd man/MacoskoRetinaData.Rd man/MairPBMCData.Rd man/MarquesBrainData.Rd man/MessmerESCData.Rd man/MuraroPancreasData.Rd man/NestorowaHSCData.Rd man/NowakowskiCortexData.Rd man/PaulHSCData.Rd man/PollenGliaData.Rd man/ReprocessedData.Rd man/RichardTCellData.Rd man/RomanovBrainData.Rd man/SegerstolpePancreasData.Rd man/ShekharRetinaData.Rd man/StoeckiusHashingData.Rd man/TasicBrainData.Rd man/UsoskinBrainData.Rd man/WuKidneyData.Rd man/XinPancreasData.Rd man/ZeiselBrainData.Rd man/ZeiselNervousData.Rd man/ZhaoImmuneLiverData.Rd man/ZhongPrefrontalData.Rd man/ZilionisLungData.Rd man/listDatasets.Rd man/scRNAseq-package.Rd tests/testthat.R tests/testthat/test-loading.R vignettes/scRNAseq.Rmd