dviraran/SingleR: Reference-based single-cell RNA-seq annotation

A computational method for unbiased cell type recognition of scRNA-seq. SingleR leverages reference transcriptomic datasets of pure cell types to infer the cell of origin of each of the single cells independently. SingleR’s annotations combined with Seurat, a processing and analysis package designed for scRNA-seq, provide a powerful tool for the investigation of scRNA-seq data

Getting started

Package details

AuthorDvir Aran
MaintainerDvir Aran <dvir.aran@ucsf.edu>
LicenseGPL 3.0
Version1.0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("dviraran/SingleR")
dviraran/SingleR documentation built on April 21, 2020, 3:23 p.m.