SingleR.PlotFeature: Plot a feature on the t-SNE plot

In dviraran/SingleR: Reference-based single-cell RNA-seq annotation

Description

Plot a feature on the t-SNE plot

Usage

SingleR.PlotFeature(SingleR, seurat, plot.feature = "MaxScore",
  dot.size = 1, title = NULL)

Arguments

SingleR	the output from the SingleR function
seurat	the seurat object
plot.feature	the feature to plot - 'MaxScore' for coloring according to the top score per cell, 'nGene' for number of non-zero genes, 'nUMI' for number of UMIs, or a gene name.
dot.size	size of the dot in the plot.

Value

ggplot2 object

dviraran/SingleR documentation built on April 21, 2020, 3:23 p.m.