convertSingleR2Browser: Convert the SingleR output object to a SingleR S4 object that...

In dviraran/SingleR: Reference-based single-cell RNA-seq annotation

Description

Convert the SingleR output object to a SingleR S4 object that can be uploaded to the SingleR browser.

Usage

convertSingleR2Browser(singler, use.singler.cluster.annot = T)

Arguments

singler	the SingleR output object
use.singler.cluster.annot	if FALSE, do not add the SingleR clusters annotations. Default is TRUE. This is used for objects that where subseted from the full object, but the SingleR clusters annotations where not regenerated.

Value

S4 SingleR object that can be uploaded to the SingleR browser

dviraran/SingleR documentation built on April 21, 2020, 3:23 p.m.