ReadSingleCellData: Internal function to read single-cell data

In dviraran/SingleR: Reference-based single-cell RNA-seq annotation

Description

Internal function to read single-cell data

Usage

ReadSingleCellData(counts, annot)

Arguments

counts	a tab delimited text file containing the counts matrix, a 10X directory name or a matrix with the counts.
annot	a tab delimited text file or a data.frame. Rownames correspond to column names in the counts data

Value

list with sc.data - the counts matrix, orig.ident - a named vector of the originial identities.

dviraran/SingleR documentation built on April 21, 2020, 3:23 p.m.