API for dviraran/SingleR
Reference-based single-cell RNA-seq annotation
| Global functions | |
|---|---|
| Combine.Multiple.10X.Datasets | Man page Source code |
| CreateBigSingleRObject | Man page Source code |
| CreateSinglerObject | Man page Source code |
| CreateSinglerSeuratObject | Man page Source code |
| CreateVariableGeneSet | Man page Source code |
| ReadSingleCellData | Man page Source code |
| SingleR | Man page Source code |
| SingleR-class | Man page |
| SingleR-package | Man page |
| SingleR.Cluster | Man page Source code |
| SingleR.Combine | Man page Source code |
| SingleR.ConfidenceTest | Man page Source code |
| SingleR.CreateKangAnnotations | Man page Source code |
| SingleR.CreateObject | Man page Source code |
| SingleR.CreateSeurat | Man page Source code |
| SingleR.DrawBoxPlot | Man page Source code |
| SingleR.DrawHeatmap | Man page Source code |
| SingleR.DrawScatter | Man page Source code |
| SingleR.FineTune | Man page Source code |
| SingleR.PlotFeature | Man page Source code |
| SingleR.PlotTsne | Man page Source code |
| SingleR.ScoreData | Man page Source code |
| SingleR.Subset | Man page Source code |
| SingleR.SubsetS4 | Source code |
| TPM | Man page Source code |
| blueprint_encode | Man page |
| calculateSignatures | Man page Source code |
| calculateSingScores | Source code |
| capitalize | Source code |
| cell.type.classification | Man page |
| clusters.map.values | Man page Source code |
| convertSingleR2Browser | Man page Source code |
| fineTuningRound | Man page Source code |
| hpca | Man page |
| human.egc | Man page |
| human_lengths | Man page |
| immgen | Man page |
| medianMatrix | Man page Source code |
| mouse.egc | Man page |
| mouse.rnaseq | Man page |
| mouse_lengths | Man page |
| quantileMatrix | Man page Source code |
| remove.Unnecessary.Data.single | Man page Source code |
| superRef | Man page Source code |
