compare_logfc_plots: Compare logFC values from limma and friends
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
compare_logfc_plots R Documentation
Compare logFC values from limma and friends
Description
There are some peculiar discrepencies among these tools, what is up with that?
Usage
compare_logfc_plots(combined_tables)
Arguments
combined_tables
The combined tables from limma et al.
Details
Invoked by combine_de_tables() in order to compare the results.
Value
Some plots
See Also
[plot_linear_scatter()]
Examples
## Not run:
limma_vs_deseq_vs_edger <- compare_logfc_plots(combined)
## Get a list of plots of logFC by contrast of LvD, LvE, DvE
## It provides comparisons against the basic analysis, but who cares about that.
## End(Not run)
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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| compare_logfc_plots | R Documentation |
Compare logFC values from limma and friends
Description
There are some peculiar discrepencies among these tools, what is up with that?
Usage
compare_logfc_plots(combined_tables)
Arguments
combined_tables |
The combined tables from limma et al. |
Details
Invoked by combine_de_tables() in order to compare the results.
Value
Some plots
See Also
[plot_linear_scatter()]
Examples
## Not run:
limma_vs_deseq_vs_edger <- compare_logfc_plots(combined)
## Get a list of plots of logFC by contrast of LvD, LvE, DvE
## It provides comparisons against the basic analysis, but who cares about that.
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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