count_nmer-character-method: Count nmers given a filename instead of genome object.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
count_nmer,character-method R Documentation
Count nmers given a filename instead of genome object.
Description
Count nmers given a filename instead of genome object.
Usage
## S4 method for signature 'character'
count_nmer(genome, pattern = "ATG", mismatch = 0)
Arguments
genome
filename of the genome in question
pattern
Pattern for which to search.
mismatch
Number of mismatches allowed.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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| count_nmer,character-method | R Documentation |
Count nmers given a filename instead of genome object.
Description
Count nmers given a filename instead of genome object.
Usage
## S4 method for signature 'character'
count_nmer(genome, pattern = "ATG", mismatch = 0)
Arguments
genome |
filename of the genome in question |
pattern |
Pattern for which to search. |
mismatch |
Number of mismatches allowed. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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