download_gbk: A genbank accession downloader scurrilously stolen from ape.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/annotation_genbank.R
download_gbk R Documentation
A genbank accession downloader scurrilously stolen from ape.
Description
This takes and downloads genbank accessions.
Usage
download_gbk(accessions = "AE009949", write = TRUE)
Arguments
accessions
An accession – actually a set of them.
write
Write the files? Otherwise return a list of the strings
Details
Tested in test_40ann_biomartgenbank.R
In this function I stole the same functionality from the ape package and set
a few defaults so that it hopefully fails less often.
Value
A list containing the number of files downloaded and the character
strings acquired.
Author(s)
The ape authors with some modifications by atb.
See Also
[ape]
Examples
written <- download_gbk(accessions = "AE009949")
written$written_file
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/annotation_genbank.R
| download_gbk | R Documentation |
A genbank accession downloader scurrilously stolen from ape.
Description
This takes and downloads genbank accessions.
Usage
download_gbk(accessions = "AE009949", write = TRUE)
Arguments
accessions |
An accession – actually a set of them. |
write |
Write the files? Otherwise return a list of the strings |
Details
Tested in test_40ann_biomartgenbank.R In this function I stole the same functionality from the ape package and set a few defaults so that it hopefully fails less often.
Value
A list containing the number of files downloaded and the character strings acquired.
Author(s)
The ape authors with some modifications by atb.
See Also
[ape]
Examples
written <- download_gbk(accessions = "AE009949")
written$written_file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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