get_kegg_sub: Provide a set of simple substitutions to convert geneIDs from...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/ontology_kegg.R
get_kegg_sub R Documentation
Provide a set of simple substitutions to convert geneIDs from KEGG->TriTryDB
Description
This function should provide 2 character lists which, when applied
sequentially, will result in a hopefully coherent set of mapped gene IDs
matching the TriTypDB/KEGG specifications.
Usage
get_kegg_sub(species = "lma")
Arguments
species
3 letter abbreviation for a given kegg type
Value
2 character lists containing the patterns and replace arguments for
gsub(), order matters!
See Also
[KEGGREST]
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/ontology_kegg.R
| get_kegg_sub | R Documentation |
Provide a set of simple substitutions to convert geneIDs from KEGG->TriTryDB
Description
This function should provide 2 character lists which, when applied sequentially, will result in a hopefully coherent set of mapped gene IDs matching the TriTypDB/KEGG specifications.
Usage
get_kegg_sub(species = "lma")
Arguments
species |
3 letter abbreviation for a given kegg type |
Value
2 character lists containing the patterns and replace arguments for gsub(), order matters!
See Also
[KEGGREST]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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