gff2gr: Rewrite a gff file as a granges with full seqinfo if...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/annotation_gff.R
gff2gr R Documentation
Rewrite a gff file as a granges with full seqinfo if possible.
Description
Rewrite a gff file as a granges with full seqinfo if possible.
Usage
gff2gr(gff, type = NULL, type_column = "type")
Arguments
gff
Input gff file.
type
Feature type to extract.
type_column
Tag from the gff file to use when extracting the type.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/annotation_gff.R
| gff2gr | R Documentation |
Rewrite a gff file as a granges with full seqinfo if possible.
Description
Rewrite a gff file as a granges with full seqinfo if possible.
Usage
gff2gr(gff, type = NULL, type_column = "type")
Arguments
gff |
Input gff file. |
type |
Feature type to extract. |
type_column |
Tag from the gff file to use when extracting the type. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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