plot_cleaved: Plot the average mass and expected intensity of a set of...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/plot_proteomics.R
plot_cleaved R Documentation
Plot the average mass and expected intensity of a set of sequences given an
enzyme.
Description
This uses the cleaver package to generate a plot of expected intensities
vs. weight for a list of protein sequences.
Usage
plot_cleaved(pep_sequences, enzyme = "trypsin", start = 600, end = 1500)
Arguments
pep_sequences
Set of protein sequences.
enzyme
One of the allowed enzymes for cleaver.
start
Limit the set of fragments from this point
end
to this point.
Value
List containing the distribution of weights and the associated plot.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/plot_proteomics.R
| plot_cleaved | R Documentation |
Plot the average mass and expected intensity of a set of sequences given an enzyme.
Description
This uses the cleaver package to generate a plot of expected intensities vs. weight for a list of protein sequences.
Usage
plot_cleaved(pep_sequences, enzyme = "trypsin", start = 600, end = 1500)
Arguments
pep_sequences |
Set of protein sequences. |
enzyme |
One of the allowed enzymes for cleaver. |
start |
Limit the set of fragments from this point |
end |
to this point. |
Value
List containing the distribution of weights and the associated plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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