plot_libsize,SummarizedExperiment,ANY,ANY-method | R Documentation |
Send a SummarizedExperiment to plot_libsize().
## S4 method for signature 'SummarizedExperiment,ANY,ANY'
plot_libsize(
data,
condition = NULL,
colors = NULL,
text = TRUE,
order = NULL,
plot_title = NULL,
yscale = NULL,
expt_names = NULL,
label_chars = 10,
...
)
data |
SummarizedExperiment presumably created by create_se(). |
condition |
Set of conditions observed in the metadata, overriding the metadata in the SE. |
colors |
Set of colors for the plot, overriding the SE metadata. |
text |
Print text with the counts/sample observed at the top of the bars? |
order |
Optionally redefine the order of the bars of the plot. |
plot_title |
Plot title! |
yscale |
Explicitly set the scale on the log or base10 scale. |
expt_names |
Optionally change the names of the bars. |
label_chars |
If the names of the bars are larger than this, abbreviate them. |
... |
Additonal arbitrary arguments. |
Plot of library sizes and a couple tables describing the data.
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