plot_pairwise_ma: Plot all pairwise MA plots in an experiment.

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Plot all pairwise MA plots in an experiment.

Description

Use affy's ma.plot() on every pair of columns in a data set to help diagnose problematic samples.

Usage

plot_pairwise_ma(data, log = NULL, ...)

Arguments

data	Expt expressionset or data frame.
log	Is the data in log format?
...	Options are good and passed to arglist().

Value

List of affy::maplots

See Also

[affy::ma.plot()]

Examples

## Not run: 
 ma_plots = plot_pairwise_ma(expt = some_expt)

## End(Not run)

elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.