plot_qq_all: Quantile/quantile comparison of the mean of all samples vs....

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Quantile/quantile comparison of the mean of all samples vs. each sample.

Description

This allows one to visualize all individual data columns against the mean of all columns of data in order to see if any one is significantly different than the cloud.

Usage

plot_qq_all(data, labels = "short", ...)

Arguments

data	Expressionset, expt, or dataframe of samples.
labels	What kind of labels to print?
...	Arguments passed presumably from graph_metrics().

Value

List containing: logs = a recordPlot() of the pairwise log qq plots. ratios = a recordPlot() of the pairwise ratio qq plots. means = a table of the median values of all the summaries of the qq plots.

See Also

[Biobase]

elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.