read_thermo_xlsx: Parse the difficult thermo fisher xlsx file.

View source: R/proteomics.R

read_thermo_xlsxR Documentation

Parse the difficult thermo fisher xlsx file.

Description

The Thermo(TM) workflow has as its default a fascinatingly horrible excel output. This function parses that into a series of data frames.

Usage

read_thermo_xlsx(xlsx_file, test_row = NULL)

Arguments

xlsx_file

The input xlsx file

test_row

A single row in the xlsx file to use for testing, as I have not yet seen two of these accursed files which had the same headers.

Value

List containing the protein names, group data, protein dataframe, and peptide dataframe.


elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.