simple_cp_enricher: Generic enrichment using clusterProfiler.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/ontology_clusterprofiler.R
simple_cp_enricher R Documentation
Generic enrichment using clusterProfiler.
Description
culsterProfiler::enricher provides a quick and easy enrichment analysis given
a set of siginficant' genes and a data frame which connects each gene to a
category.
Usage
simple_cp_enricher(sig_genes, de_table, go_db = NULL)
Arguments
sig_genes
Set of 'significant' genes as a table.
de_table
All genes from the original analysis.
go_db
Dataframe of GO->ID matching the gene names of sig_genes to GO
categories.
Value
Table of 'enriched' categories.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/ontology_clusterprofiler.R
| simple_cp_enricher | R Documentation |
Generic enrichment using clusterProfiler.
Description
culsterProfiler::enricher provides a quick and easy enrichment analysis given a set of siginficant' genes and a data frame which connects each gene to a category.
Usage
simple_cp_enricher(sig_genes, de_table, go_db = NULL)
Arguments
sig_genes |
Set of 'significant' genes as a table. |
de_table |
All genes from the original analysis. |
go_db |
Dataframe of GO->ID matching the gene names of sig_genes to GO categories. |
Value
Table of 'enriched' categories.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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