single_topgo_tree: Collapse the logic for collecting topgo trees into one little...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/ontology_plots.R
single_topgo_tree R Documentation
Collapse the logic for collecting topgo trees into one little function.
Description
Collapse the logic for collecting topgo trees into one little function.
Usage
single_topgo_tree(
tg,
score_column = "fisher_mf",
node_data = "fmf_godata",
score_limit = 0.1,
sigforall = TRUE
)
Arguments
tg
TopGO result.
score_column
Use this column for the topgo scores.
node_data
and this column for the cateogyr names.
score_limit
The scores must be better than this.
sigforall
Calculate significance for all categories.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/ontology_plots.R
| single_topgo_tree | R Documentation |
Collapse the logic for collecting topgo trees into one little function.
Description
Collapse the logic for collecting topgo trees into one little function.
Usage
single_topgo_tree(
tg,
score_column = "fisher_mf",
node_data = "fmf_godata",
score_limit = 0.1,
sigforall = TRUE
)
Arguments
tg |
TopGO result. |
score_column |
Use this column for the topgo scores. |
node_data |
and this column for the cateogyr names. |
score_limit |
The scores must be better than this. |
sigforall |
Calculate significance for all categories. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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