variance_expt: Add some gene annotations based on the mean/variance in the...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
variance_expt R Documentation
Add some gene annotations based on the mean/variance in the data.
Description
Why? Maria Adelaida is interested in pulling the least-variant
genes in our data, this seems like it might be generally
applicable. Note, I made this slightly redundant by doing a cpm on
the data; as a result the proportion and mean values are
effectively identical.
Usage
variance_expt(expt, convert = "cpm", transform = "raw", norm = "raw")
Arguments
expt
Expressionset to which to add this information.
convert
Use this conversion,
transform
and transformation,
norm
and normalization.
Value
Slightly modified gene annotations including the mean/variance.
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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| variance_expt | R Documentation |
Add some gene annotations based on the mean/variance in the data.
Description
Why? Maria Adelaida is interested in pulling the least-variant genes in our data, this seems like it might be generally applicable. Note, I made this slightly redundant by doing a cpm on the data; as a result the proportion and mean values are effectively identical.
Usage
variance_expt(expt, convert = "cpm", transform = "raw", norm = "raw")
Arguments
expt |
Expressionset to which to add this information. |
convert |
Use this conversion, |
transform |
and transformation, |
norm |
and normalization. |
Value
Slightly modified gene annotations including the mean/variance.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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