varpart_summaries: Attempt to use variancePartition's fitVarPartModel()...
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
View source: R/model_varpartition.R
varpart_summaries R Documentation
Attempt to use variancePartition's fitVarPartModel() function.
Description
Note the word 'attempt'. This function is so ungodly slow that it probably
will never be used.
Usage
varpart_summaries(expt, factors = c("condition", "batch"), cpus = 6)
Arguments
expt
Input expressionset.
factors
Set of factors to query
cpus
Number of cpus to use in doParallel.
Value
Summaries of the new model, in theory this would be a nicely
batch-corrected data set.
See Also
[variancePartition]
elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.
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View source: R/model_varpartition.R
| varpart_summaries | R Documentation |
Attempt to use variancePartition's fitVarPartModel() function.
Description
Note the word 'attempt'. This function is so ungodly slow that it probably will never be used.
Usage
varpart_summaries(expt, factors = c("condition", "batch"), cpus = 6)
Arguments
expt |
Input expressionset. |
factors |
Set of factors to query |
cpus |
Number of cpus to use in doParallel. |
Value
Summaries of the new model, in theory this would be a nicely batch-corrected data set.
See Also
[variancePartition]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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