addDefaultMed: Add default medium of an organism to arena.

In euba/BacArena: Modeling Framework for Cellular Communities in their Environments

Add default medium of an organism to arena.

Description

The generic function addDefaultMed uses the lower bounds defined in an organism's model file to compose minimal medium.

Usage

addDefaultMed(object, org, unit = "mM")

## S4 method for signature 'Arena'
addDefaultMed(object, org, unit = "mM")

Arguments

object	An object of class Arena.
org	An object of class Organism
unit	A character used as chemical unit to set the amount of the substances to be added (valid values are: mmol/cell, mmol/cm2, mmol/arena, mM)

euba/BacArena documentation built on March 27, 2024, 2:33 p.m.