findFeeding2: Function for investigation of feeding between phenotypes

In euba/BacArena: Modeling Framework for Cellular Communities in their Environments

Function for investigation of feeding between phenotypes

Description

The generic function findFeeding2

Usage

findFeeding2(object, time, mets, rm_own = T, ind_threshold = 0, collapse = F)

## S4 method for signature 'Eval'
findFeeding2(object, time, mets, rm_own = T, ind_threshold = 0, collapse = F)

Arguments

object	An object of class Eval.
time	A numeric vector giving the simulation steps which should be plotted.
mets	Character vector of substance names which should be considered
rm_own	A boolean flag indicating if interactions within same species should be plotted
ind_threshold	A number indicating the threshold of individuals to be considered as producers/consumers
collapse	A boolean flag indicating if all phenotypes for every species should be collapsed to either producers or consumers

Value

Graph (igraph)

euba/BacArena documentation built on Aug. 29, 2024, 11:15 p.m.