findInArena: Function for searching a keyword in arena organisms and media

In euba/BacArena: Modeling Framework for Cellular Communities in their Environments

Function for searching a keyword in arena organisms and media

Description

The generic function findInArena tries to find information (e.g. full names) about a specific keyword

Usage

findInArena(object, pattern, search_rea = TRUE, search_sub = TRUE)

## S4 method for signature 'Arena'
findInArena(object, pattern, search_rea = TRUE, search_sub = TRUE)

Arguments

object	An object of class Arena.
pattern	A pattern for searching
search_rea	Only search for reactions
search_sub	Only search for substances

Examples

data(Ec_core)
bac <- Bac(Ec_core)
arena <- Arena(n=20,m=20)
arena <- addOrg(arena,bac,amount=10)
findInArena(arena, "acetate")

euba/BacArena documentation built on March 27, 2024, 2:33 p.m.