tsv_paths_from_args: Generate data.frame with paths to coordinate TSV files

In gerbeldo/tidycell: CellID Data Analysis Inside the Tidyverse

Generate data.frame with paths to coordinate TSV files

Description

Generate data.frame with paths to coordinate TSV files

Usage

tsv_paths_from_args(
  arguments,
  position_pattern = ".*Position(\\d+)$",
  tsv_pattern = "^out_all_masks.tsv$"
)

Arguments

arguments	As produced by rcell2::cellArgs2.
position_pattern	A regex pattern with one group for the integer position number, extracted from the directory name holding the TSV file.
tsv_pattern	A regex pattern matching the name of the TSV file.

gerbeldo/tidycell documentation built on Aug. 15, 2022, 2:35 p.m.