strat_dist: Calculate distance-stratified summary
In haizi-zh/hictools: Home-made handy tools for Hi-C
strat_dist R Documentation
Calculate distance-stratified summary
Description
Calculate distance-stratified summary
Usage
strat_dist(hic_matrix, smoothing = TRUE, min_nonzero = 10)
Arguments
hic_matrix
A Hi-C object
smoothing
Whether to apply smoothing for large-distance strata.
Default is TRUE.
min_nonzero
If smoothing, in each stratum, the minimal number of
non-zero entries. Default is 10.
haizi-zh/hictools documentation built on June 29, 2022, 4:32 a.m.
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| strat_dist | R Documentation |
Calculate distance-stratified summary
Description
Calculate distance-stratified summary
Usage
strat_dist(hic_matrix, smoothing = TRUE, min_nonzero = 10)
Arguments
hic_matrix |
A Hi-C object |
smoothing |
Whether to apply smoothing for large-distance strata.
Default is |
min_nonzero |
If smoothing, in each stratum, the minimal number of non-zero entries. Default is 10. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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