idconvert: Convert ID between ENTREZID to SYMBOL or other type ID based...

In hurlab/RichR: Function Enrichment analysis and Network construction

Convert ID between ENTREZID to SYMBOL or other type ID based on bioconductor annotation package

Description

Convert ID between ENTREZID to SYMBOL or other type ID based on bioconductor annotation package

Usage

idconvert(species, keys, fkeytype, tkeytype)

Arguments

species:	you can check the support species by using showData()
fkeytype:	the gene type you want to convert
tkeytype:	the gene type you want to get

Author(s)

Kai Guo

Examples

## Not run: 
  hsako<-buildAnnot(species="human",keytype="SYMBOL",anntype = "KEGG")
  hsako<-as.data.frame(hsako)
  gene=sample(unique(hsako$GeneID),1000)
  id<-idconvert(species="human",fkeytype="SYMBOL",tkeytype="ENTREZID")

## End(Not run)

hurlab/RichR documentation built on Feb. 5, 2024, 8:07 p.m.