Files in hurlab/RichR
Function Enrichment analysis and Network construction
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/00-AllClasses.R
R/AllGenerics.R
R/RcppExports.R
R/compareResult.R
R/dplyr-arrange.R
R/dplyr-filter.R
R/dplyr-group_by.R
R/dplyr-mutate.R
R/dplyr-rename.R
R/dplyr-select.R
R/dplyr-slice.R
R/dplyr-summarise.R
R/dplyr_exportR.R
R/enrich.R
R/ggbar.R
R/ggdot.R
R/ggheatmap.R
R/ggnetmap.R
R/ggnetwork.R
R/ggrich.R
R/kappa.R
R/makeAnnot.R
R/makeown.R
R/misc.R
R/richGO.R
R/richGSEA.R
R/richKEGG.R
R/richLevel.R
R/zzz.R
README.md
_config.yml
data/godata.rdata
data/kegg.rdata
data/module.rda
data/path.rda
data/pathway.rda
man/Annot-class.Rd
man/GO_child.Rd
man/GSEAResult-class.Rd
man/buildAnnot-methods.Rd
man/buildMSIGDB.Rd
man/buildOwn.Rd
man/compareGSEA.Rd
man/compareResult.Rd
man/comparedot.Rd
man/detail.GSEAResult.Rd
man/detail.Rd
man/detail.richResult.Rd
man/dot-calculate_Enrichment_Score.Rd
man/dot-clean.char.Rd
man/dot-getmsig.Rd
man/dot-kappa.Rd
man/dot-kappa_cluster_internal.Rd
man/dot-makeGOdata.Rd
man/dot-makeKOMdata.Rd
man/dot-makeKOdata.Rd
man/dot-makeROdata.Rd
man/dot-merge_term.Rd
man/dot-paste.char.Rd
man/enrich-ANY-Annot-method.Rd
man/enrich-ANY-data.frame-method.Rd
man/enrich-methods.Rd
man/enrich_internal.Rd
man/getann.Rd
man/getdetail.Rd
man/ggGSEA.Rd
man/ggbar-methods.Rd
man/ggbar.Rd
man/ggdot-methods.Rd
man/ggdot.Rd
man/ggdot_internal.Rd
man/ggheatmap.Rd
man/ggnetmap.Rd
man/ggnetplot-method.Rd
man/ggnetplot-richResult-method.Rd
man/ggnetplot.Rd
man/ggnetwork-methods.Rd
man/ggnetwork.Rd
man/ggrich_internal.Rd
man/idconvert.Rd
man/msigdbinfo.Rd
man/msigdbr.Rd
man/overlap.Rd
man/plotGSEA.Rd
man/rbind.GSEAResult.Rd
man/rbind.richResult.Rd
man/reexports.Rd
man/result.Rd
man/reverseList.Rd
man/richCluster-data.frame-method.Rd
man/richCluster-richResult-method.Rd
man/richCluster.Rd
man/richDAVID.Rd
man/richGO-ANY-Annot-method.Rd
man/richGO-ANY-data.frame-method.Rd
man/richGO-methods.Rd
man/richGO_internal.Rd
man/richGSEA-ANY-Annot-method.Rd
man/richGSEA-ANY-data.frame-method.Rd
man/richGSEA-methods.Rd
man/richGSEA_internal.Rd
man/richKEGG-ANY-Annot-method.Rd
man/richKEGG-ANY-data.frame-method.Rd
man/richKEGG-methods.Rd
man/richKEGG_internal.Rd
man/richLevel-ANY-Annot-method.Rd
man/richLevel-ANY-data.frame-method.Rd
man/richLevel-methods.Rd
man/richLevel_internal.Rd
man/richResult-class.Rd
man/showData.Rd
man/vec_to_df.Rd
richR.Rproj
src/RcppExports.cpp
src/hyper.cpp
src/name_table.cpp
src/sf.cpp
src/unique.cpp
vignettes/richR.Rmd
