API for jameshay218/zikaProj
zikaInfer
| Global functions | |
|---|---|
| .onLoad | Source code |
| add_inc_plot | Source code |
| average_buckets | Man page Source code |
| b.calc | Man page Source code |
| calc_deviance | Man page Source code |
| calc_post_mean | Man page Source code |
| calc_post_var | Man page Source code |
| calculate_AR | Man page Source code |
| calculate_BIC | Man page Source code |
| calculate_DIC | Man page Source code |
| calculate_gamma_mode | Man page Source code |
| combine_chains | Man page Source code |
| convert_date_to_number | Source code |
| convert_name_to_location | Man page Source code |
| convert_name_to_location_factor | Man page Source code |
| convert_number_to_date | Source code |
| createLocationParTable | Man page Source code |
| createParTable | Man page Source code |
| create_forecast_function | Source code |
| create_polygons | Source code |
| create_posterior | Man page Source code |
| cumul_true | Man page Source code |
| density.calc | Man page Source code |
| density_plot_func | Man page Source code |
| density_plot_state | Man page Source code |
| exampleParTab | Man page |
| extra_microceph_calculations | Man page Source code |
| find_peak_times | Man page Source code |
| forecast_CRS | Man page Source code |
| forecast_known_inc_seir | Source code |
| forecast_microceph | Man page Source code |
| forecast_model_normal | Source code |
| fromUnitScale | Man page Source code |
| generateAllowableParams | Man page Source code |
| generateStartingParTab | Man page Source code |
| generate_foi | Man page Source code |
| generate_micro_curve | Man page Source code |
| generate_multiple_data | Man page Source code |
| generate_peak_time_table | Source code |
| generate_plot_date_labels | Man page |
| generate_probM | Man page Source code |
| generate_probM_aux | Man page Source code |
| generate_probM_forecast | Man page Source code |
| generate_probM_forecast_OLD | Man page Source code |
| generate_riskI | Man page Source code |
| generate_riskS | Man page Source code |
| generate_x_labels | Source code |
| generate_y0s | Man page Source code |
| getDaysPerMonth | Man page Source code |
| get_best_pars | Man page Source code |
| get_correct_order | Man page Source code |
| get_epidemic_locations | Man page Source code |
| get_index_pars | Man page Source code |
| get_lower_micro_bound | Man page Source code |
| get_max_micro | Man page Source code |
| get_max_micro_day | Man page Source code |
| get_microceph_range | Man page Source code |
| get_upper_micro_bound | Man page Source code |
| inc_plot | Source code |
| incidence_likelihood | Man page Source code |
| incidence_likelihood_norm | Man page Source code |
| indiv_model_fit | Source code |
| isolate_location | Man page Source code |
| likelihood_probM | Man page Source code |
| likelihood_probM_norm | Man page Source code |
| load_mcmc_chains | Man page Source code |
| locationInfo | Man page |
| main_model_fits | Source code |
| make_micro_dat | Man page |
| median.quantile | Man page Source code |
| microceph_plot | Source code |
| microceph_v1 | Man page Source code |
| microceph_v2 | Man page Source code |
| microceph_v3 | Man page Source code |
| microceph_v4 | Man page Source code |
| mvr_proposal | Man page Source code |
| overlapPlots | Source code |
| parTabSetup | Man page Source code |
| parTabSetup_aux | Man page Source code |
| plot_MCMC | Man page |
| plot_best_trajectory_multi | Man page Source code |
| plot_best_trajectory_single | Man page Source code |
| plot_micro_bounds | Man page |
| plot_random_microceph_curves | Man page |
| plot_setup_data | Man page Source code |
| posterior_CRS | Man page Source code |
| posterior_complex_buckets | Man page Source code |
| posterior_inc | Man page Source code |
| posterior_known_inc | Man page Source code |
| posterior_known_inc_seir | Man page Source code |
| posterior_simple_buckets | Man page Source code |
| print_version_names | Man page Source code |
| proposalfunction | Man page Source code |
| r0.calc | Man page Source code |
| r0.vector | Man page Source code |
| read_all_data | Man page Source code |
| read_inipars | Man page Source code |
| rm_scale | Man page Source code |
| run_metropolis_MCMC | Man page Source code |
| scaletuning | Man page Source code |
| setupListPars | Man page Source code |
| setupLocationParTable | Man page Source code |
| setupParsLong | Man page Source code |
| setupParsODE | Man page Source code |
| simeq | Man page Source code |
| solveSEIRModel | Man page Source code |
| solveSEIRModel_lsoda | Man page Source code |
| solveSEIRModel_rlsoda | Man page Source code |
| sum_buckets | Man page Source code |
| sum_n_vector | Man page Source code |
| summarise_chain | Man page Source code |
| to.png | Man page |
| to.svg | Man page |
| toUnitScale | Man page Source code |
| zikaInfer | Man page |
| zikaInfer-package | Man page |
