rebin_cov: Re-bin coverage data
In jmonlong/scCNAutils: Functions to analyze copy number aberrations in single-cell data
rebin_cov R Documentation
Re-bin coverage data
Description
The new bins are overlapped with the regions in cov_df to compute a weight.
The coverage in the new bin is the weighted sum of the coverage in overlapping
regions of cov_df.
Usage
rebin_cov(cov_df, bins)
Arguments
cov_df
a data.frame with coverage information.
bins
a data.frame or GRanges object with the new bins.
Details
Coordinates in data.frame are expected to be defined by columns names 'chr',
'start' and 'end'.
Value
a data.frame with new bins
Author(s)
Jean Monlong
jmonlong/scCNAutils documentation built on Feb. 8, 2025, 8:09 a.m.
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| rebin_cov | R Documentation |
Re-bin coverage data
Description
The new bins are overlapped with the regions in cov_df to compute a weight. The coverage in the new bin is the weighted sum of the coverage in overlapping regions of cov_df.
Usage
rebin_cov(cov_df, bins)
Arguments
cov_df |
a data.frame with coverage information. |
bins |
a data.frame or GRanges object with the new bins. |
Details
Coordinates in data.frame are expected to be defined by columns names 'chr', 'start' and 'end'.
Value
a data.frame with new bins
Author(s)
Jean Monlong
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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