array_PlotSexQC: Generate Sex dependent QC Plot.
In kauralasoo/eQTLUtils:
View source: R/array_qc_utils.R
array_PlotSexQC R Documentation
Generate Sex dependent QC Plot.
Description
Generate Sex dependent QC Plot.
Usage
array_PlotSexQC(
study_data,
assay_name = "exprs",
html_output = FALSE,
output_dir = "./"
)
Arguments
study_data
SummarizedExperiment file to be analysed
assay_name
Assay name to be analysed (exprs, norm_exprs or batch_exprs)
html_output
Boolean value if html output should be created (Default:FALSE)
output_dir
html file output dir, if html_output is TRUE (Default:current directory)
Value
plotly object of SEX QC
Author(s)
Nurlan Kerimov, Liis Kolberg
kauralasoo/eQTLUtils documentation built on March 12, 2023, 8:50 p.m.
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View source: R/array_qc_utils.R
| array_PlotSexQC | R Documentation |
Generate Sex dependent QC Plot.
Description
Generate Sex dependent QC Plot.
Usage
array_PlotSexQC( study_data, assay_name = "exprs", html_output = FALSE, output_dir = "./" )
Arguments
study_data |
SummarizedExperiment file to be analysed |
assay_name |
Assay name to be analysed (exprs, norm_exprs or batch_exprs) |
html_output |
Boolean value if html output should be created (Default:FALSE) |
output_dir |
html file output dir, if html_output is TRUE (Default:current directory) |
Value
plotly object of SEX QC
Author(s)
Nurlan Kerimov, Liis Kolberg
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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