assign_populations: Assigns populations using distance matrix from...

In kauralasoo/eQTLUtils:

Assigns populations using distance matrix from generate_distance_matrix() function

Description

Assigns populations using distance matrix from generate_distance_matrix() function

Usage

assign_populations(distance_matrix, abs_threshold = 0.02, rel_threshold = 1.7)

Arguments

distance_matrix	distance matrix dataframe created by generate_distance_matrix() function
abs_threshold	sample's minimum distance to any reference population should be less than this threshold to be assigned to population. Default value is 0.02
rel_threshold	sample's minimum distance to any reference population should be rel_threshold times smaller than second minimum distanceto be assigned to population. Default value is 1.7

Author(s)

Nurlan Kerimov

kauralasoo/eQTLUtils documentation built on March 12, 2023, 8:50 p.m.