extractGenotypeMatrixFromGDS: Extract a genotype matrix corresponding to a specific genomic...
In kauralasoo/eQTLUtils:
View source: R/GDSArray_helpers.R
extractGenotypeMatrixFromGDS R Documentation
Extract a genotype matrix corresponding to a specific genomic region
Description
Extract a genotype matrix corresponding to a specific genomic region
Usage
extractGenotypeMatrixFromGDS(chr, start, end, variant_information, gdsfile)
Arguments
chr
Chromosome of the region
start
Start coordinate of the region
end
End coordinate of the reion
variant_information
Variant infromation constructed by importVariantInformationFromGDS
gdsfile
Path to the GDS file
Value
genotype matrix
kauralasoo/eQTLUtils documentation built on March 12, 2023, 8:50 p.m.
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View source: R/GDSArray_helpers.R
| extractGenotypeMatrixFromGDS | R Documentation |
Extract a genotype matrix corresponding to a specific genomic region
Description
Extract a genotype matrix corresponding to a specific genomic region
Usage
extractGenotypeMatrixFromGDS(chr, start, end, variant_information, gdsfile)
Arguments
chr |
Chromosome of the region |
start |
Start coordinate of the region |
end |
End coordinate of the reion |
variant_information |
Variant infromation constructed by importVariantInformationFromGDS |
gdsfile |
Path to the GDS file |
Value
genotype matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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