normaliseSE_tpm: Normalises the assay of SE with TPM method
In kauralasoo/eQTLUtils:
View source: R/SummarizedExperiment_helpers.R
normaliseSE_tpm R Documentation
Normalises the assay of SE with TPM method
Description
Normalises the assay of SE with TPM method
Usage
normaliseSE_tpm(se, assay_name = "counts", fragment_length = 250)
Arguments
se
Summarized Experiment object
assay_name
custom assay_name (default: counts)
fragment_length
custom fragment_length (default: 250)
Author(s)
Kaur Alasoo
kauralasoo/eQTLUtils documentation built on March 12, 2023, 8:50 p.m.
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View source: R/SummarizedExperiment_helpers.R
| normaliseSE_tpm | R Documentation |
Normalises the assay of SE with TPM method
Description
Normalises the assay of SE with TPM method
Usage
normaliseSE_tpm(se, assay_name = "counts", fragment_length = 250)
Arguments
se |
Summarized Experiment object |
assay_name |
custom assay_name (default: counts) |
fragment_length |
custom fragment_length (default: 250) |
Author(s)
Kaur Alasoo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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