calculatePermutationPvalues: Calculate emiprical permutation p-values

Description Usage Arguments Value Author(s)

View source: R/qtl_postProcess.R

Description

For each element in the te vector of original p-values, count the number of permutation p-values that are smaller than that.

Usage

1
calculatePermutationPvalues(raw_pvalues, max_permutation_pvalues)

Arguments

raw_pvalues

Vector of raw p-values -log10 form the original data.

output_dir

Vector of maximum -log10 pvalues from the permuted data.

Value

None

Author(s)

Kaur Alasoo


kauralasoo/seqUtils documentation built on May 20, 2019, 7:42 a.m.