constructGeneData: For a given gene_id, extract its expression from...
In kauralasoo/seqUtils:
Description
Usage
Arguments
Value
Author(s)
View source: R/expression_list_functions.R
Description
For a given gene_id, extract its expression from expression_matrix and join with metadata.
Usage
1
constructGeneData(gene_id, expression_matrix, sample_metadata)
Arguments
gene_id
Gene id, corresponds to a row name of expression matrix.
expression_matrix
Matrix of gene exrpression; rows - gene ids, cols - sample_ids.
sample_metadata
Data frame with metadata for each sample.
Value
data frame that has gene expression in value column and metadata in other columns.
Author(s)
Kaur Alasoo
kauralasoo/seqUtils documentation built on May 20, 2019, 7:42 a.m.
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Description Usage Arguments Value Author(s)
View source: R/expression_list_functions.R
Description
For a given gene_id, extract its expression from expression_matrix and join with metadata.
Usage
1 | constructGeneData(gene_id, expression_matrix, sample_metadata)
|
Arguments
gene_id |
Gene id, corresponds to a row name of expression matrix. |
expression_matrix |
Matrix of gene exrpression; rows - gene ids, cols - sample_ids. |
sample_metadata |
Data frame with metadata for each sample. |
Value
data frame that has gene expression in value column and metadata in other columns.
Author(s)
Kaur Alasoo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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