eigenMTExportGenotypes: Export genotype data in format suitable for eigenMT

Description Usage Arguments

View source: R/qtl_eigenMT.R

Description

Creates two text files in the eigenMT_dir directory: [prefix].snp_positions.txt and [prefix].genotypes.txt.

Usage

1
eigenMTExportGenotypes(vcf_file, eigenMT_dir, prefix)

Arguments

vcf_file

Genotype data imported with gdsToMatrix

eigenMT_dir

Directory of the eigenMT input files

prefix

Prefix of the output files,


kauralasoo/seqUtils documentation built on Sept. 24, 2018, 1:11 a.m.