filterInteractionResults: Filter QTL interaction test results based on RASQUAL effect...

Description Usage Arguments Value

View source: R/qtl_test_interactions.R

Description

Filter QTL interaction test results based on RASQUAL effect size

Usage

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filterInteractionResults(conditions, interaction_result, pvalue_list,
  fdr_thresh = 0.1)

Arguments

conditions

Character vector of condition names.

interaction_result

Output from the matrixeqtlTestInteraction function.

pvalue_list

List of RASQUAL gene-SNP results by condition.

fdr_thresh

Interaction test FDR threshold.

Value

Data frame augmented with Rasqual effect sizes and p-values in each condition.


kauralasoo/seqUtils documentation built on Sept. 24, 2018, 1:11 a.m.