tests/testthat/test-codonmat2xy.R
In kullrich/MSA2dist: MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
data(hiv)
test_that("codonmat2pnps()", {
expect_true((hiv |> dnastring2codonmat() |> codonmat2xy())$NonSynSum[1]
== 40)
expect_true((hiv |> dnastring2codonmat() |>
codonmat2xy(threads=2))$NonSynSum[1] == 40)
})
kullrich/MSA2dist documentation built on April 26, 2024, 4:43 p.m.
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data(hiv)
test_that("codonmat2pnps()", {
expect_true((hiv |> dnastring2codonmat() |> codonmat2xy())$NonSynSum[1]
== 40)
expect_true((hiv |> dnastring2codonmat() |>
codonmat2xy(threads=2))$NonSynSum[1] == 40)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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