ILPConstrained: Construct Coverage ILP.
In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis
View source: R/optimization_ILP.R
ILPConstrained R Documentation
Construct Coverage ILP.
Description
Constructs an ILP modeling the primer set cover problem.
Usage
ILPConstrained(D, cvg.matrix, time.limit = NULL, presolve.active = FALSE)
Arguments
D
Binary dimerization matrix.
cvg.matrix
Binary coverage matrix.
time.limit
Time limit for ILP optimization in seconds.
presolve.active
Whether the ILP presolver should be used.
This is set to FALSE by default, since presolving may lead
to inferior solutions. However, for large problems presolving
might be useful.
Value
An instance of the set cover ILP.
matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.
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View source: R/optimization_ILP.R
| ILPConstrained | R Documentation |
Construct Coverage ILP.
Description
Constructs an ILP modeling the primer set cover problem.
Usage
ILPConstrained(D, cvg.matrix, time.limit = NULL, presolve.active = FALSE)
Arguments
D |
Binary dimerization matrix. |
cvg.matrix |
Binary coverage matrix. |
time.limit |
Time limit for ILP optimization in seconds. |
presolve.active |
Whether the ILP presolver should be used.
This is set to |
Value
An instance of the set cover ILP.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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