compute.all.primer.subsets.ILP: Computation of Primer Subsets

In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis

Computation of Primer Subsets

Description

Computes all optimal primer subsets and stores their plots.

Usage

compute.all.primer.subsets.ILP(
  primer.df,
  template.df,
  k,
  groups,
  cur.results.loc,
  required.cvg = 1
)

Arguments

primer.df	Primer data frame.
template.df	Template data frame.
k	Subset size-increment.
groups	Identifiers of template groups in order to limit coverage to certain groups of template sequences.
cur.results.loc	Location for storing the results.
required.cvg	The required coverage ratio.

Value

Write-out of results.

matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.