get.init.file.name: File Name for Initialized Primers.

In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis

File Name for Initialized Primers.

Description

Constructs a filename for initialized primers.

Usage

get.init.file.name(
  cur.results.loc,
  GROUP,
  primer.lengths,
  mode.directionality,
  allowed.region.definition,
  init.algo,
  max.degen,
  conservation
)

Arguments

cur.results.loc	Directory where the file should be stored.
GROUP	Sample name of templates.
primer.lengths	Interval of desired primer lengths.
mode.directionality	Directionality of the primers
allowed.region.definition	Definition of the allowed region.
init.algo	Initialization algorithm identifier.
max.degen	Maximum degeneracy of primers.
conservation	Required ratio of primer conservation.

Value

A filename for the initialized primers.

matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.