optimize.template.binding.regions.dir: Optimization of Binding Regions

In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis

Optimization of Binding Regions

Description

Optimizes the template binding regions.

Usage

optimize.template.binding.regions.dir(
  template.df,
  annealing.temperature = NULL,
  primer.lengths,
  mode.directionality = c("fw", "rev", "both")
)

Arguments

template.df	Template data frame.
annealing.temperature	Temperature at which to compute secondary structures.
primer.lengths	Target length of primers that are to be used.
mode.directionality	Direction of primers.

Value

List with intervals indicating improved primer binding regions.

matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.