subset.ILP: Subset ILP Constructor
In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis
View source: R/optimization_ILP.R
subset.ILP R Documentation
Subset ILP Constructor
Description
Constructs an ILP for selecting optimal primer subsets.
Usage
## S3 method for class 'ILP'
subset(primer.df, template.df, k)
Arguments
primer.df
Primer data frame to be subsetted.
template.df
Template data frame.
k
Required number of primers to be selected.
Details
Here, "optimal" refers to a subset of a certain size that maximizes the coverage.
Value
An ILP for choosing the primer subset of size k with the largest coverage.
matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.
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View source: R/optimization_ILP.R
| subset.ILP | R Documentation |
Subset ILP Constructor
Description
Constructs an ILP for selecting optimal primer subsets.
Usage
## S3 method for class 'ILP'
subset(primer.df, template.df, k)
Arguments
primer.df |
Primer data frame to be subsetted. |
template.df |
Template data frame. |
k |
Required number of primers to be selected. |
Details
Here, "optimal" refers to a subset of a certain size that maximizes the coverage.
Value
An ILP for choosing the primer subset of size k with the largest coverage.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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