update_primer_cvg: Updates the Primer Coverage.

In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis

Updates the Primer Coverage.

Description

Updates the most important columns in a primer data frame according to the selected coverage definition. Only coverage events with less or equal than the allowed number of mismatches according to the selected coverage definition will be retained.

Usage

update_primer_cvg(
  primer.df,
  template.df,
  allowed.mismatches,
  cvg.definition = c("constrained", "basic")
)

Arguments

primer.df	A Primers object.
template.df	A Templates object.
allowed.mismatches	A numeric giving the maximal number of allowed.mismatches.
cvg.definition	The definition of coverage to be used, either "constrained" or "basic".

Value

A primer data frame with modified coverage information.

matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.