visualize.filtering.results: Visualization of Filtering Results.

In matdoering/openPrimeR: Multiplex PCR Primer Design and Analysis

Visualization of Filtering Results.

Description

Visualizes the filtering results.

Usage

visualize.filtering.results(
  sample,
  results.loc,
  mode.directionality,
  excluded.df,
  template.df,
  filtered.df,
  filtered.stats,
  stats.relax,
  primer_conc,
  na_salt_conc,
  mg_salt_conc,
  k_salt_conc,
  tris_salt_conc,
  settings,
  required.cvg
)

Arguments

sample	Primer design run identifier.
results.loc	Location where the filtering results are stored.
mode.directionality	Design direction.
excluded.df	Data frame with excluded primers.
template.df	Template data frame.
filtered.df	Primer data frame containing the primers that passed the constraints.
stats.relax	Filtering statistics after relaxation.
primer_conc	Primer concentration.
na_salt_conc	Sodium ion concentration.
mg_salt_conc	Magensium ion concentration.
k_salt_conc	Potassium ion concentration.
tris_salt_conc	Tris ion concentration.
settings	A DesignSettings object.
required.cvg	The required coverage.
template_conc	Template concentration.

Value

Write-out of filtering results.

matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.