API for mevers/RNAModR
Functional Analysis of RNA Modifications
| Global functions | |
|---|---|
| AddAlpha | Man page Source code |
| BuildTx | Man page Source code |
| CheckClass | Man page Source code |
| CheckClassTxLocConsistency | Man page Source code |
| CheckClassTxLocRef | Man page Source code |
| CheckPkgDependencies | Man page Source code |
| CollapseTxBySec | Man page Source code |
| Datasets | Man page |
| DedupeBasedOnNearestRef | Man page Source code |
| DownsampleTxLoc | Man page Source code |
| EstimateCIFromBS | Man page Source code |
| FilterTxLoc | Man page Source code |
| GenerateNull | Man page Source code |
| GetColPal | Man page Source code |
| GetDistNearestStartStop | Man page Source code |
| GetEEJunct | Man page Source code |
| GetGC | Man page Source code |
| GetGeneIds | Man page Source code |
| GetId | Man page |
| GetId,txLoc-method | Man page |
| GetLoci | Man page |
| GetLoci,txLoc-method | Man page |
| GetMotifLoc | Man page Source code |
| GetNumberOfLoci | Man page |
| GetNumberOfLoci,txLoc-method | Man page |
| GetRef | Man page |
| GetRef,txLoc-method | Man page |
| GetRegions | Man page |
| GetRegions,txLoc-method | Man page |
| GetRelDistNearest | Man page Source code |
| GetSplicingSites | Man page Source code |
| GetTxBySec | Man page Source code |
| GetTxDb | Man page Source code |
| GetTxRegionCoordinates | Man page Source code |
| GetTxSeq | Man page Source code |
| GetVersion | Man page |
| GetVersion,txLoc-method | Man page |
| IsEmptyChar | Man page Source code |
| LoadRefTx | Man page Source code |
| MatchFlank | Man page Source code |
| PerformSanityCheck | Man page Source code |
| PlotAbundance.generic | Man page Source code |
| PlotEnrichment.Generic | Man page Source code |
| PlotGC | Man page Source code |
| PlotOverlap | Man page Source code |
| PlotRelDistDistribution | Man page Source code |
| PlotRelDistEnrichment | Man page Source code |
| PlotRelStartStopEnrichment | Man page Source code |
| PlotSectionDistribution | Man page Source code |
| PlotSectionEnrichment | Man page Source code |
| PlotSeqLogo | Man page Source code |
| PlotSpatialDistribution | Man page Source code |
| PlotSpatialEnrichment | Man page Source code |
| PlotSpatialRatio | Man page Source code |
| ReadBED | Man page Source code |
| SafeLoad | Man page Source code |
| SmartMap | Man page Source code |
| SmartMap.ToTx | Man page Source code |
| SubsampleTxLoc | Man page Source code |
| TxLoc2GRangesList | Man page Source code |
| Unfactor | Man page Source code |
| WriteBED | Man page Source code |
| WriteCSV | Man page Source code |
| show,txLoc-method | Man page |
| testGLM | Source code |
| txLoc-accessors | Man page |
| txLoc-class | Man page |
