Man pages for mmariani123/MethylMasteR
What the Package Does (One Line, Title Case)
| AutoCorrectPeak.mm | AutoCorrectPeak.mm |
| binding_frames_mm | binding_frames_mm |
| calc_seg_state | calc_seg_state |
| champ.EpiMod | champ.EpiMod |
| champ.import.mm | champ.import.mm |
| champ.load.mm | champ.load.mm |
| champ.process.mm | champ.process.mm |
| champ.QC | champ.QC() |
| cnvOncoPrint | cnvOncoPrint |
| DoEpiMod | DoEpiMod |
| DoIntEpi450k | DoIntEpi450k |
| dot-clusterCalls | .clusterCalls |
| dot-coerce.pData.mm | .coerce.pData.mm |
| dot-funnorm.mm | .funnorm.mm |
| dot-getFreq.mm | .getfreq.mm |
| dot-getROHits | .getROHits |
| dot-getType.mm | .getType.mm |
| dot-pruneMultiAssign | .pruneMultiAssign |
| dot-roPopRanges | .roPopRanges |
| dot-scoreRegion | .scoreRegion |
| epicopy.mm | epicopy.mm |
| fast_450k_binning | fast_450_k_binning |
| FemModShow | FemModShow |
| findSegments2 | findSegments2 |
| GenStatM | GenStatM.R |
| getLRR.mm | getLRR.mm |
| harmonized_rg_sets | harmonized_rg_sets |
| infer_sex_karyotype | infer_sex_karyotype |
| LRRtoCNA.mm | LRRtoCNA.mm |
| methyl_master | methyl_master |
| methyl_master_assay | methyl_master_assay |
| methyl_master_champ | methyl_master_champ |
| methyl_master_custom | ##methyl_master_custom |
| methyl_master_epicopy | methyl_master_epicopy |
| methyl_master_formatting_champ | methyl_master_formatting_champ |
| methyl_master_formatting_custom | methyl_master_formatting_custom |
| methyl_master_formatting_epicopy | methyl_master_formatting_epicopy |
| methyl_master_formatting_hm450 | methyl_master_formatting_hm450 |
| methyl_master_formatting_sesame | methyl_master_formatting_sesame |
| methyl_master_hm450 | methyl_master_hm450 |
| methyl_master_load_data_objects | methyl_master_load_data_objects |
| methyl_master_load_packages | methyl_master_load_packages |
| methyl_master_olaps_and_visualize | methyl_master_olaps_and_visualize |
| methyl_master_plot_individual | methyl_master_plot_individual |
| methyl_master_population_ranges | methyl_master_population_ranges |
| methyl_master_prepare_sample_sheet | methyl_master_prepare_sample_sheet |
| methyl_master_qreduceassay | methyl_master_qreduceassay |
| methyl_master_select_random_samples | methyl_master_load_data_objects |
| methyl_master_sesame | ##methyl_master_sesame |
| methyl_master_tcga_clin_data | methyl_master_tcga_clin_data |
| methyl_measter_get_cord_sex | methyl_master_get_cord_sex |
| plotRecurrentRegions | plotRecurrentRegions |
| plotRegions | CopyNumber450kCancer |
| print.CopyNumber450kCancer_data | print.CopyNumber450kCancer_data |
| ReadData | ReadData |
| read.metharray.mm | readmetharray.mm |
| read.metharray.sheet.mm | read.metharray.sheet.mm |
| readSheet.mm | readSheet.mm |
| visualizeSegments.mm | visualizeSegments.mm |
| weightedmean | weightedmean |
| weightedmean.epicopy | weightedmean.epicopy |
