classify_exons: Classify exons as single, first, inner or last.

View source: R/classify_exons.R

classify_exonsR Documentation

Classify exons as single, first, inner or last.

Description

This function takes a gtf file from GENCODE and returns a data frame in the R Global Environment containing an additional column which states the exons position within a transcript; whether they are a single exon, first, inner or last exons.

Usage

classify_exons(input)

Arguments

input

The name of the downloaded gtf file from GENCODE website

Value

A data frame with additional column describing exon positions within a transcript

Examples

df <- load_gtf("gencode.v27.lncRNAs.gtf")
classify_exons(df)

monahton/GencoDymo documentation built on Dec. 13, 2024, 1:23 a.m.