classify_exons: Classify exons as single, first, inner or last.
In monahton/GencoDymo: Data Extraction and Manipulation from the GENCODE Database
Description
Usage
Arguments
Value
Examples
View source: R/classify_exons.R
Description
This function takes a gtf file from GENCODE and returns a data frame in the R Global Environment containing an additional column which states the exons position within a transcript; whether they are a single exon, first, inner or last exons.
Usage
1
classify_exons(input)
Arguments
input
The name of the downloaded gtf file from GENCODE website
Value
A data frame with additional column describing exon positions within a transcript
Examples
1
2
df <- load_gtf("gencode.v27.lncRNAs.gtf")
classify_exons(df)
monahton/GencoDymo documentation built on Nov. 29, 2021, 9:16 a.m.
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Description Usage Arguments Value Examples
View source: R/classify_exons.R
Description
This function takes a gtf file from GENCODE and returns a data frame in the R Global Environment containing an additional column which states the exons position within a transcript; whether they are a single exon, first, inner or last exons.
Usage
1 | classify_exons(input)
|
Arguments
input |
The name of the downloaded gtf file from GENCODE website |
Value
A data frame with additional column describing exon positions within a transcript
Examples
1 2 | df <- load_gtf("gencode.v27.lncRNAs.gtf")
classify_exons(df)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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