spliced_trans_length: Calculate the length of splices transcripts
In monahton/GencoDymo: Data Extraction and Manipulation from the GENCODE Database
View source: R/spliced_trans_length.R
spliced_trans_length R Documentation
Calculate the length of splices transcripts
Description
This function takes a data frame of GENCODE annotations as input. It calculates the length of the transcripts considering only the length of their corresponding exons.
Usage
spliced_trans_length(input)
Arguments
input
The name of the downloaded gtf file from GENCODE website
Value
A data frame of the transcript ids and their length when spliced
Examples
load_gtf("gencode.v27.lncRNAs.gtf")
spliced_trans_length(gtf_df)
monahton/GencoDymo documentation built on Dec. 13, 2024, 1:23 a.m.
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View source: R/spliced_trans_length.R
| spliced_trans_length | R Documentation |
Calculate the length of splices transcripts
Description
This function takes a data frame of GENCODE annotations as input. It calculates the length of the transcripts considering only the length of their corresponding exons.
Usage
spliced_trans_length(input)
Arguments
input |
The name of the downloaded gtf file from GENCODE website |
Value
A data frame of the transcript ids and their length when spliced
Examples
load_gtf("gencode.v27.lncRNAs.gtf")
spliced_trans_length(gtf_df)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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